GTEx colocalization
202 colocalized genes · 688 comparisons
PP.H4 is the posterior probability that the GWAS and eQTL signals share one causal variant. Rows are tissue–gene comparisons with PP.H4 ≥ 0.5.
| Gene | Tissue | Tissue class | PP.H4 ▼ | nSNPs |
|---|---|---|---|---|
| RP11-973H7.1 | Adrenal_Gland | Endocrine | 0.848004466549297 | 2368 |
| RP11-973H7.1 | Heart_Atrial_Appendage | Heart | 0.846859084147853 | 2481 |
| ZNF618 | Skin_Sun_Exposed_Lower_leg | Epithelial | 0.846569843795229 | 1779 |
| RP11-435I10.3 | Thyroid | Endocrine | 0.846077812843473 | 1585 |
| ATG16L1 | Pituitary | Endocrine | 0.844723898793028 | 2257 |
| NPIPB6 | Whole_Blood | Blood | 0.842010679251734 | 1629 |
| DOCK3 | Skin_Not_Sun_Exposed_Suprapubic | Epithelial | 0.841911490446602 | 718 |
| SULT1A2 | Esophagus_Gastroesophageal_Junction | Digestive | 0.841902658248307 | 1103 |
| TUFM | Ovary | Female Reproductive | 0.840083963319881 | 988 |
| RTEL1 | Whole_Blood | Blood | 0.839673487089515 | 4029 |
| SH2B1 | Adipose_Visceral_Omentum | Adipose | 0.839436411610917 | 1393 |
| SULT1A2 | Uterus | Female Reproductive | 0.839361051451946 | 919 |
| ATG16L1 | Artery_Tibial | Blood Vessel | 0.834724883883105 | 2930 |
| CDC37P1 | Heart_Left_Ventricle | Heart | 0.83402078041435 | 1264 |
| RP11-435I10.5 | Thyroid | Endocrine | 0.832820682669485 | 1585 |
| CDC37P1 | Whole_Blood | Blood | 0.831972767817529 | 1629 |
| CCDC116 | Heart_Atrial_Appendage | Heart | 0.83088704993179 | 1488 |
| STMN3 | Whole_Blood | Blood | 0.830681971584509 | 4029 |
| CDC37P1 | Prostate | Male Reproductive | 0.830395479833853 | 977 |
| CDC37P1 | Nerve_Tibial | Nervous | 0.830348265541418 | 1573 |
| CCDC116 | Brain_Cortex | Brain | 0.829322865316389 | 1167 |
| RP11-1348G14.4 | Nerve_Tibial | Nervous | 0.827868722666228 | 1573 |
| RP11-435I10.5 | Nerve_Tibial | Nervous | 0.827503385245049 | 1573 |
| IL27 | Testis | Male Reproductive | 0.827216896744032 | 1412 |
| CICP4 | Skin_Not_Sun_Exposed_Suprapubic | Epithelial | 0.827125736837758 | 3419 |
| GPX1 | Artery_Tibial | Blood Vessel | 0.826257994445561 | 1425 |
| CCDC116 | Muscle_Skeletal | Skeletal Muscle | 0.824636361823839 | 1799 |
| CDC37P1 | Uterus | Female Reproductive | 0.824495604039834 | 919 |
| SBK1 | Skin_Sun_Exposed_Lower_leg | Epithelial | 0.824180289772857 | 1582 |
| CDC37P1 | Breast_Mammary_Tissue | Breast | 0.819196641246333 | 1297 |
| CDC37P1 | Esophagus_Muscularis | Digestive | 0.818466534470709 | 1333 |
| RNASET2 | Skin_Not_Sun_Exposed_Suprapubic | Epithelial | 0.818305290630211 | 3760 |
| ORMDL3 | Adipose_Subcutaneous | Adipose | 0.817787267654564 | 2099 |
| TUFM | Esophagus_Gastroesophageal_Junction | Digestive | 0.8176319636925 | 1103 |
| ARFRP1 | Brain_Cortex | Brain | 0.815211769576044 | 3114 |
| RP11-1348G14.4 | Adipose_Visceral_Omentum | Adipose | 0.814624091933029 | 1393 |
| SULT1A2 | Skin_Not_Sun_Exposed_Suprapubic | Epithelial | 0.813887067848386 | 1287 |
| ZNF300P1 | Skin_Not_Sun_Exposed_Suprapubic | Epithelial | 0.813872936651989 | 2903 |
| RP11-1348G14.6 | Adipose_Subcutaneous | Adipose | 0.813561758638974 | 1605 |
| ZNF300P1 | Heart_Left_Ventricle | Heart | 0.812542721736603 | 2905 |
| ATG16L1 | Heart_Atrial_Appendage | Heart | 0.810654478617975 | 2578 |
| RP11-1348G14.4 | Thyroid | Endocrine | 0.810628928615703 | 1585 |
| NUPR1 | Artery_Aorta | Blood Vessel | 0.810561528986284 | 1275 |
| SH2B1 | Whole_Blood | Blood | 0.810497462895878 | 1629 |
| DOCK3 | Heart_Atrial_Appendage | Heart | 0.810413005363855 | 713 |
| NUPR1 | Esophagus_Muscularis | Digestive | 0.810310352777193 | 1333 |
| SH2B1 | Adipose_Subcutaneous | Adipose | 0.810261277607357 | 1605 |
| AL133458.1 | Lung | Lung | 0.809585367102847 | 4049 |
| ZNF300P1 | Adipose_Subcutaneous | Adipose | 0.809292731220135 | 3140 |
| SULT1A2 | Spleen | Immune Organ | 0.808167969879822 | 999 |